Difference between revisions of "Page personnelle de Florent Nageotte"
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Associate Professor in Medical Robotics
Télécom Physique Strasbourg / ICUBE
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| − | + | <center><B><font color="#0066BB" size="5"> Associate Professor in Medical Robotics </font></B></center> | |
| − | <center><B><font color="# | + | <center><B><font color="#0066BB" size="5"> Télécom Physique Strasbourg / ICUBE </font></B></center> |
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| − | + | [http://icube-avr.unistra.fr/index.php/Page_personnelle_de_Florent_Nageotte français]|[[Florent Nageotte Personal Web Page|'''english''']] | |
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| − | + | [https://avr.icube.unistra.fr/index.php/Page_personnelle_de_Florent_Nageotte français] | [[Florent Nageotte Personal Web Page|'''english''']] | |
| − | + | [[Image:florent_nageotte_id3.jpg|thumb|right|200px]] | |
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| − | + | <!-- <center><B><font color="#2244CC" size="3"> Maître de Conférences </font></B></center> | |
| + | <center><B><font color="#2244CC" size="3"> Enseignant en Automatique, chercheur en Robotique </font></B></center> | ||
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| − | <!-- | + | <!--[http://eavr.u-strasbg.fr/wiki_en/index.php/Florent_Nageotte_Personal_Web_Page english] | [[Page personnelle de Florent Nageotte|'''français''']] |
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=Curriculum Vitae= | =Curriculum Vitae= | ||
| − | * | + | * 2021: Habilitation to direct research (HDR) (defended on Sept. 7, [https://seafile.unistra.fr/f/153b4595225f4b3585fa/?dl=1 electronic document]) (Rev.: A. Menciassi, P. Poignet, J.Szewczyk, Pres. J. Troccaz) |
| − | * 2000 : | + | * Since 2020: Head of IRMC and Healthtech Master tracks of IRIV Master |
| − | * | + | * 2019: Internal transfer to Telecom Physique Strasbourg (Engineering school) |
| − | + | * 2018-2020: Expert in the Health technology committee (CES 19) of French National Research Funding Agency (ANR) | |
| + | * 2006: Recruited as Associate Pr. at University of Strasbourg (formerly Louis Pasteur University) | ||
| + | * 2005: PhD from Louis Pasteur University, Strasbourg, in Medical Robotics under the supervision of M. de Mathelin. | ||
| + | * 2000: Master in Photonics, Image and Cybernetics, ULP, Strasbourg. Intern at the Center for Distributed Robotics at the University of Minnesota, under the direction of N. Papanikolopoulos | ||
| + | * 2000: Engineering diploma from ENSPS shool, Strasbourg. Major in robotics. | ||
| − | = | + | =Responsibilities= |
| − | * | + | * Member of the Executive Committee of the [https://healthtech.unistra.fr/ Healthtech Interdisciplinary thematic Institute] |
| − | * | + | * Scientific manager of Medical axis in national robotic equipment platform (TIRREX) |
| + | * Head of the [https://healthtech.unistra.fr/training/master-program Healthtech track] of [https://www.master-iriv.fr/accueil IRIV master] , funded by Healthtech ITI | ||
| + | * Head of the [https://www.master-iriv.fr/m2/parcours-irmc IRMC track] of IRIV master hosted by Telecom Physique Strasbourg (M1 IMed / M2 IRMC) | ||
| + | * Referent for Alumni for the engineering school, responsible of yearly poll by the "Conférence des Grandes Ecoles" on former students professional future | ||
| − | = | + | =Teaching= |
| − | + | Associate Professor at [http://www.unistra.fr/ Université de Strasbourg], attached to [http://www.telecom-physique.fr/ Télécom Physique Strasbourg], (engineering school) since February 2019 (previously at the Physics and engineering department). I mainly teach medical robotics and computer vision for student in engineering at Télécom Physique Strasbourg, mainly at the master 2 level. I also teach automatic control at the Bachelor and Master level for student in the Physics and Engineering department. <!--[http://www-ulp.u-strasbg.fr/]-->. | |
| − | == | + | == Courses == |
| − | === | + | === In TPS, Healthtech Master and Third year TIS DTMI (M2 level), === |
| − | * | + | * CAMI in digestive surgery <!--([http://eavr.u-strasbg.fr/~nageotte/GMCAO_Chirurgie_digestive_2016.pdf Support de cours])--> |
| − | * | + | * Computer vision for medical robotics (pose estimation de pose, robotic registration and visual servoing) |
| + | <!--([http://eavr.u-strasbg.fr/~nageotte/Support_cours_TIS_1920_vimp_4students.pdf Transparents] de cours (version du 01/12/2019), [http://eavr.u-strasbg.fr/~nageotte/Fascicule_exercices_TIS_1920.pdf Fascicule de TDs])--> | ||
<!--[http://eavr.u-strasbg.fr/~nageotte/Corrections_exercices.pdf Corrigés des exercices])--> | <!--[http://eavr.u-strasbg.fr/~nageotte/Corrections_exercices.pdf Corrigés des exercices])--> | ||
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=== TPS, M2 IRIV / IRMC === | === TPS, M2 IRIV / IRMC === | ||
| − | * | + | * Registration in medical robotics. |
| − | ** Support de cours en [http://eavr.u-strasbg.fr/~nageotte/Support_cours_IRIV_1819_vimp4students.pdf version électronique] et fascicule d'[http://eavr.u-strasbg.fr/~nageotte/Fascicule_exercices_IRIV_IRMC.pdf exercices]. | + | <!--** Support de cours en [http://eavr.u-strasbg.fr/~nageotte/Support_cours_IRIV_1819_vimp4students.pdf version électronique] et fascicule d'[http://eavr.u-strasbg.fr/~nageotte/Fascicule_exercices_IRIV_IRMC.pdf exercices]. |
| + | --> | ||
| − | === | + | === Electronic systems and Mechatronics Bachelor (Third year) === |
| − | * | + | * Course and tutorials on continuous-time systems control |
| + | <!-- et travaux dirigés d'automatique (Outils d'analyse et de correction des systèmes continus) | ||
**[http://eavr.u-strasbg.fr/~nageotte/Transp_cours_L3ESA_L3Mecha_19.pdf Transparents du cours] (version du 04/01/18) | **[http://eavr.u-strasbg.fr/~nageotte/Transp_cours_L3ESA_L3Mecha_19.pdf Transparents du cours] (version du 04/01/18) | ||
**[http://eavr.u-strasbg.fr/~nageotte/Transp_cours_L3ESA_L3Mecha_19_vimp4students.pdf Version imprimable] | **[http://eavr.u-strasbg.fr/~nageotte/Transp_cours_L3ESA_L3Mecha_19_vimp4students.pdf Version imprimable] | ||
**[http://eavr.u-strasbg.fr/~nageotte/fascicule_L3ESA_2019.pdf sujets de TD] | **[http://eavr.u-strasbg.fr/~nageotte/fascicule_L3ESA_2019.pdf sujets de TD] | ||
* Travaux pratiques d'automatique | * Travaux pratiques d'automatique | ||
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| + | |||
| + | === Micro and Nano Electronics Master (First year) === | ||
| + | * Course and tutorials on discrete-time systems control | ||
| − | + | <!--* Cours et travaux dirigés d'automatique (Outils d'analyse et de correction des systèmes numériques) | |
| − | * Cours et travaux dirigés d'automatique (Outils d'analyse et de correction des systèmes numériques) | ||
**[http://eavr.u-strasbg.fr/~nageotte/Cours_Autom_M1MNE_2020.pdf version électronique du cours] | **[http://eavr.u-strasbg.fr/~nageotte/Cours_Autom_M1MNE_2020.pdf version électronique du cours] | ||
**[http://eavr.u-strasbg.fr/~nageotte/Support_cours_master_2020_vimp.pdf Transparents de cours] (version de 2020 au format pdf) | **[http://eavr.u-strasbg.fr/~nageotte/Support_cours_master_2020_vimp.pdf Transparents de cours] (version de 2020 au format pdf) | ||
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<!--+ [[Media:Support_cours_master_2012_vimp.pdf|version imprimable]]. Des versions plus complètes comprenant les synthèses algébriques (RST, réponse pile), le principe du feedforward et le principe du modèle interne sont disponibles sur simple demande.--> | <!--+ [[Media:Support_cours_master_2012_vimp.pdf|version imprimable]]. Des versions plus complètes comprenant les synthèses algébriques (RST, réponse pile), le principe du feedforward et le principe du modèle interne sont disponibles sur simple demande.--> | ||
<!--([[Media:Cours_num_M1MNE.pdf|version numérique du cours]])--> | <!--([[Media:Cours_num_M1MNE.pdf|version numérique du cours]])--> | ||
| − | **[http://eavr.u-strasbg.fr/~nageotte/sujetsTP_M1MNE_2016.pdf Travaux pratiques d'automatique] | + | <!--**[http://eavr.u-strasbg.fr/~nageotte/sujetsTP_M1MNE_2016.pdf Travaux pratiques d'automatique]--> |
<!--**[[Media:Support_chap5_7.pdf|Transparents cours chap 5 à 7]] (version provisoire au format pdf)--> | <!--**[[Media:Support_chap5_7.pdf|Transparents cours chap 5 à 7]] (version provisoire au format pdf)--> | ||
| − | **[[Media:Aide_RST.pdf|Aide à la synthèse RST]] | + | <!--**[[Media:Aide_RST.pdf|Aide à la synthèse RST]]--> |
<!--**[[Media:Cours_num.pdf|Cours complet]] (format pdf)--> | <!--**[[Media:Cours_num.pdf|Cours complet]] (format pdf)--> | ||
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| − | + | === TPS FIP Third year === | |
| − | + | * Medical robotics course | |
| − | === | + | <!--Cours de [http://eavr.u-strasbg.fr/~nageotte/MedicalRobotics_FIP_2017.pdf robotique médicale] et de recalage--> |
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<!--[http://eavr.u-strasbg.fr/~nageotte/Support_Cours_FIP_1617_vimp_4students.pdf recalage]--> | <!--[http://eavr.u-strasbg.fr/~nageotte/Support_Cours_FIP_1617_vimp_4students.pdf recalage]--> | ||
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<!--** [http://eavr.u-strasbg.fr/~nageotte/correction_TD_2010_2011.pdf Correction] partielle des TDs --> | <!--** [http://eavr.u-strasbg.fr/~nageotte/correction_TD_2010_2011.pdf Correction] partielle des TDs --> | ||
| − | == | + | == Summer school on Surgical Robotics in Montpellier == |
<!--* cours d'asservissements visuels appliqués à la robotique médicale, donné lors de la 3ème école d'été européenne de robotique médicale à Montpellier le 24 septembre 2007. [http://www.lirmm.fr/uee07/school.htm Lien] sur la page de l'école où vous pouvez trouver les supports de présentation (transparents et vidéos)--> | <!--* cours d'asservissements visuels appliqués à la robotique médicale, donné lors de la 3ème école d'été européenne de robotique médicale à Montpellier le 24 septembre 2007. [http://www.lirmm.fr/uee07/school.htm Lien] sur la page de l'école où vous pouvez trouver les supports de présentation (transparents et vidéos)--> | ||
| − | * | + | * Tutorial on visual servoing applied to medical robotics, given during the 10th Summer School on Surgical Robotics, on September 2021. [https://www.lirmm.fr/sssr-2021/ Link] to the summer school webpage |
<!--et [http://eavr.u-strasbg.fr/~nageotte/SlidesVisualServoing_Nageotte.pdf transparents] de la présentation--> | <!--et [http://eavr.u-strasbg.fr/~nageotte/SlidesVisualServoing_Nageotte.pdf transparents] de la présentation--> | ||
| − | = | + | =Research= |
| + | |||
| + | My research is driven by medical applications where robotics and computer vision can be useful for improving the capabilities of surgeons. In the past years, I have been especially interested in the development of robotic solutions based on cable-driven flexible instruments and endoscopes (STRAS system) and in the use of images (endoscopic white light and OCT) to guide robotic motions (ROBOT project). | ||
| − | + | <!-- | |
| − | + | Robotic assistance to medical and surgical procedures: | |
* [[Chirurgie_transluminale | Assistance à la chirurgie transluminale]] (projet Anubis dans le cadre du pôle de compétitivité Alsace "Innovations Thérapeutiques" : développement de gestes autonomes et compensation de mouvement physiologique | * [[Chirurgie_transluminale | Assistance à la chirurgie transluminale]] (projet Anubis dans le cadre du pôle de compétitivité Alsace "Innovations Thérapeutiques" : développement de gestes autonomes et compensation de mouvement physiologique | ||
| − | * [http:// | + | * [http://icube-avr.unistra.fr/en/index.php/STRAS Assistance à la chirurgie endoluminale]: Development, control and telemanipulation of robotic systems based on flexible endoscopes. Application to colorectal cancers treatments. |
| + | <!-- * [[Assistance à la suture]] en chirurgie laparoscopique--> | ||
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| − | * | + | * PhD theses supervision (defended theses) |
| − | ** Gaelle Thomas, | + | ** Gaelle Thomas, defended on October 2021, with J. Vappou and L. Barbé (Robotic Assistance to Blood-Brain barrier opening with focused ultrasounds), in the scope of ANR project 3BOPUS led by CEA - Neurospin (B. Larrat) |
| − | ** | + | ** Rafael Aleluia Porto, defended on January 2021 (Learning-based control of flexible endoscopes, partly funded by CAMI labex) |
| + | ** Laure-Anaïs Chanel, thèse soutenue en mars 2016 (Traitement par HIFU robotisé sous imagerie échographique, funded by CAMI labex) | ||
| + | ** Paolo Cabras, defendd in février 2016 : 3D Pose Estimation of Continuously Deformable Instruments in Robotic Endoscopic Surgery (funded by CAMI labex): [http://eavr.u-strasbg.fr/~nageotte/These_Paolo_Cabras_version_finale.pdf manuscript] | ||
| + | ** Antonio De Donno, defended in December 2013 (Assistance à la chirurgie endoluminale et à trocart unique) | ||
| + | ** Bérengère Bardou, defended in November 2011 (Développement et commande d'un système robotique pour l'assistance à la chirurgie transluminale) | ||
| + | ** Laurent Ott, defended in November 2009 (compensation de mouvements physiologiques en endoscopie flexible). Prix de thèse de l'UDS. | ||
| − | * Co- | + | * Theses in progress: |
| − | ** Fernando Gonzalez Herrera, | + | ** Guillaume Lods (with Benoit Rosa and Bernard Bayle), since October 2021 |
| − | ** Guiqiu Liao, | + | ** Valentina Scarponi (with Stéphane Cotin, funded by Healthtech), since October 2021 |
| − | ** Paul Mondou, | + | ** Thibault Poignonec (with Nabil Zemiti (LIRMM) and Bernard Bayle, funded by CAMI Labex), since October 2019 (Shared control for minimally invasive surgery) |
| + | |||
| + | * Co-supervisions: | ||
| + | ** Fernando Gonzalez Herrera, (with Benoit Rosa,Gianni Borghesan and Emmanuel Vander Poorten (KUL)) since February 2020 | ||
| + | ** Guiqiu Liao (with Michalina Gora, Benoit Rosa and Diego Dall'Alba (University Verona), since October 2019 | ||
| + | ** Paul Mondou (with Jonathan Vappou and Benoit Larrat (CEA Neurospin)), funded by CAMI Labex, since October 2020 | ||
<!--***Norbert Masson, depuis 2006 (traitement temps réel d'images endoscopiques)--> | <!--***Norbert Masson, depuis 2006 (traitement temps réel d'images endoscopiques)--> | ||
| + | * Recent Master students | ||
| + | ** François Lavieille | ||
| + | ** Thibault Poignonec | ||
| + | ** Xuan Thao Ha | ||
| + | ** Mohamed Amine Falek | ||
| + | |||
| + | == Research interests== | ||
| + | |||
| + | * Robotic Assistance to flexible endoscopy, [http://icube-avr.unistra.fr/en/index.php/STRAS STRAS project] | ||
| + | * Vision-based control for medical instruments | ||
| + | * Estimation through vision | ||
| + | * Trajectory planning | ||
| + | * Cable-driven robotic systems | ||
| + | * Image-based registration | ||
| + | |||
| + | == Projects == | ||
| + | |||
| + | * ProteCT (2012-2016), 36 monthes, led by B. Bayle (AVR-ICube), partners: IHU Strasbourg, Siemens, funded by ARC fundation, | ||
| + | Development of a robot for positioning and inserting needles in non vascular interventional radiology. | ||
| + | |||
| + | * EASE (2014 – 2018), 42 monthes. Coordination: ICube, funded by SATT Conectus. Partners: IRCAD, Karl Storz. | ||
| + | ** Development of a version of the [http://icube-avr.unistra.fr/en/index.php/STRAS STRAS robot] compatible with clinics: https://hal.archives-ouvertes.fr/hal-02377106/ | ||
| + | ** Preclinical validation in the IRCAD: https://www.gastrojournal.org/article/S0016-5085(19)30367-1/pdf | ||
| + | |||
| + | |||
| + | * ROBOT (2017-2020), 48 monthes, led by Nicolas Andreff (FEMTO-ST), funded by INSERM Plan Cancer 2014-2019. Combining robotics and OCT for optical biopsies in the digestive tract. | ||
| + | ** Post-doctoral position of Zhongkai Zhang. Robotic control of OCT for tissues scanning: https://hal.archives-ouvertes.fr/hal-03281611/document | ||
| + | ** Detection of flexible instruments using optical flow: https://www.frontiersin.org/articles/10.3389/frobt.2019.00086/full | ||
| + | |||
| + | * 3BOPUS (2018-2021) Robotic Assistance to Blood-Brain Barrier opening with Focused Ultrasounds, funded by ANR, led by CEA Neurospin | ||
| + | ** PhD thesis of Gaelle Thomas and Paul Mondou | ||
| − | + | * [https://atlas-itn.eu/ ATLAS], Innovative Training Network (2019-2023), led by KU Leuven (Emmanuel Vander Poorten) | |
| + | ** PhD thesis of Fernando Gonzalez Herrera | ||
| + | ** PhD thesis of Guiqiu Liao. Correction of OCT image acquisitions https://www.sciencedirect.com/science/article/pii/S1361841522000081?via%3Dihub, Robotic OCT acquisitions https://hal.archives-ouvertes.fr/hal-03274296/document | ||
| − | * | + | * ALLEGRO-HM Endoscopic procedures guided by hyperspectral imaging |
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==Publications== | ==Publications== | ||
| − | === | + | <!-- |
| + | ===Selected publications=== | ||
* Combining Differential Kinematics and Optical Flow for Automatic Labeling of Continuum Robots in Minimally Invasive Surgery, dans Frontiers in Robotics and IA, september 2019, [https://www.frontiersin.org/articles/10.3389/frobt.2019.00086/full Article en open access] | * Combining Differential Kinematics and Optical Flow for Automatic Labeling of Continuum Robots in Minimally Invasive Surgery, dans Frontiers in Robotics and IA, september 2019, [https://www.frontiersin.org/articles/10.3389/frobt.2019.00086/full Article en open access] | ||
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* [[Media:These_florent.pdf|Thèse (2005)]] | * [[Media:These_florent.pdf|Thèse (2005)]] | ||
| − | === | + | ===List of publications=== |
| + | --> | ||
<!-- | <!-- | ||
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| − | = | + | == Invited talks == |
| + | |||
| + | * Course on visual servoing at Summer School on Surgical Robotics (since 2011). | ||
| + | * French-Belgian days of medical robotics in Brussels « Robotic assistance to intraluminal surgery for colorectal cancer treatment », June 14,15 2018 | ||
| + | * Rhenane association of Gastroenterology, 12/15/2018 : « Robotique en endoscopie : où en est-on en 2018 ? » | ||
| + | * Plenary talk at Journées Nationales de la Recherche en Robotique organized by GDR robotique, oct. 2019, « Continuum robotics for intraluminal surgery – Towards safe and efficient minimally invasive surgery » | ||
| + | |||
| + | = Open position for PhD thesis = | ||
| + | |||
| + | We are looking for a student with background in computer vision or medical image processing for a PhD thesis to start in October 2022 on the correction of volumic OCT robotic-driven acquisitions. | ||
| + | The complete description of the project can be found [https://docs.google.com/document/d/15X5s6UyHxq-0eVzQa6YUJLdKYxKjXlUj72Gwh6HmcEg/edit?usp=sharing here]. | ||
| + | |||
| + | =Personal area= | ||
{| | {| | ||
=== Seattle, WA (ICRA 2015) === | === Seattle, WA (ICRA 2015) === | ||
| − | |[[Image:P1040158.jpg|thumb|left|200px | | + | |[[Image:P1040158.jpg|thumb|left|200px | Downtown from Lake Union]] |
| − | |[[Image:P1040271.jpg|thumb|left|200px | | + | |[[Image:P1040271.jpg|thumb|left|200px | Welcome Dinner at the Experience Music Project / Science Fiction Museum]] |
| − | |[[Image:P1040357.jpg|thumb|left|200px | | + | |[[Image:P1040357.jpg|thumb|left|200px | North view from Columbia Center]] |
|} | |} | ||
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{| | {| | ||
| − | === Tokyo (Medical robotics seminar | + | === Tokyo (Medical robotics seminar at the french embassy) === |
| − | |[[Image:P1010652.jpg|thumb|left|150px | | + | |[[Image:P1010652.jpg|thumb|left|150px | Asakusa Shrine]] |
| − | |[[Image:P1010704.jpg|thumb|left|200px | Tokyo | + | |[[Image:P1010704.jpg|thumb|left|200px | Tokyo from Sunshine60]] |
|[[Image:P1010748.jpg|thumb|left|200px | Shibuya by night]] | |[[Image:P1010748.jpg|thumb|left|200px | Shibuya by night]] | ||
|} | |} | ||
| Line 428: | Line 283: | ||
|[[Image:cimg4411.jpg|thumb|left|200px | Downtown Minneapolis]] | |[[Image:cimg4411.jpg|thumb|left|200px | Downtown Minneapolis]] | ||
| − | |[[Image:cimg4401.jpg|thumb|left|200px | | + | |[[Image:cimg4401.jpg|thumb|left|200px | The largest Mall in the USA]] |
| − | |[[Image:cimg4488.jpg|thumb|left|200px | | + | |[[Image:cimg4488.jpg|thumb|left|200px | Lake Calhoun)]] |
|} | |} | ||
{| | {| | ||
| − | === | + | === Japan (Icra09, Kobe) === |
| − | |[[Image:cimg3594.jpg|thumb|left|200px | Kyoto - | + | |[[Image:cimg3594.jpg|thumb|left|200px | Kyoto - Kinkaku-Ji]] |
| − | |[[Image:cimg3414.jpg|thumb|left|200px | Kobe | + | |[[Image:cimg3414.jpg|thumb|left|200px | Kobe in sunlight]] |
| − | |[[Image:cimg3460.jpg|thumb|left|200px | ... | + | |[[Image:cimg3460.jpg|thumb|left|200px | ... and at night]] |
|} | |} | ||
{| | {| | ||
| − | === | + | === Scottsdale, AZ (Biorob08) === |
| − | |[[Image:cimg2963.jpg|thumb|left|200px | | + | |[[Image:cimg2963.jpg|thumb|left|200px | Scottsdale at sunset]] |
| − | |[[Image:cimg3031.jpg|thumb|left|200px | | + | |[[Image:cimg3031.jpg|thumb|left|200px | The "Sun Valley" viewed from "Camel Moutain"]] |
| − | |[[Image:cimg2949.jpg|thumb|left|150px | | + | |[[Image:cimg2949.jpg|thumb|left|150px | The "best student" rest]] |
|} | |} | ||
{| | {| | ||
| − | === | + | === California (Icra08, pasadena) === |
| − | |[[Image:cimg2093.jpg|thumb|left|200px | | + | |[[Image:cimg2093.jpg|thumb|left|200px | Flock of Sealions]] |
| − | |[[Image:cimg2173.jpg|thumb|left|200px | | + | |[[Image:cimg2173.jpg|thumb|left|200px | Spare vehicules]] |
|[[Image:cimg2060.jpg|thumb|left|200px | Santa Barbara]] | |[[Image:cimg2060.jpg|thumb|left|200px | Santa Barbara]] | ||
|} | |} | ||
{| | {| | ||
| − | === | + | === Beijing (Iros06) === |
| − | |[[Image:cimg0767.jpg|thumb|left|200px | | + | |[[Image:cimg0767.jpg|thumb|left|200px | Summer Palace]] |
| − | |[[Image:cimg0811.jpg|thumb|left|200px | | + | |[[Image:cimg0811.jpg|thumb|left|200px | Turtle soup]] |
| − | |[[Image:cimg0831.jpg|thumb|left|200px | Grande muraille | + | |[[Image:cimg0831.jpg|thumb|left|200px | The Great Wall in Grande muraille in mist]] |
|} | |} | ||
{| | {| | ||
| − | === | + | === Ontario (visit by MDRobotics september 06) === |
| − | |[[Image:cimg0586.jpg|thumb|left|200px | | + | |[[Image:cimg0586.jpg|thumb|left|200px | Niagara falls]] |
| − | |[[Image:cimg0624.jpg|thumb|left|200px | Toronto | + | |[[Image:cimg0624.jpg|thumb|left|200px | Toronto from CN tower]] |
| − | |[[Image:cimg0646.jpg|thumb|left|150px | | + | |[[Image:cimg0646.jpg|thumb|left|150px | CN tower, Toronto]] |
|} | |} | ||
{| | {| | ||
| − | === | + | === San Diego (Medical Imaging 05) === |
| − | |[[Image:IMG_0899.jpg|thumb|left|200px | | + | |[[Image:IMG_0899.jpg|thumb|left|200px | Palace]] |
|[[Image:IMG_0614.jpg|thumb|left|200px | Balboa park]] | |[[Image:IMG_0614.jpg|thumb|left|200px | Balboa park]] | ||
| − | |[[Image:IMG_0792.jpg|thumb|left|200px | | + | |[[Image:IMG_0792.jpg|thumb|left|200px | Dolphins in open sea]] |
|} | |} | ||
{| | {| | ||
| − | === | + | === Chicago (Cars04) === |
| − | |[[Image:Photo 032.jpg|thumb|left|200px | | + | |[[Image:Photo 032.jpg|thumb|left|200px | |
| − | |||
| − | |||
| − | |||
Latest revision as of 23:18, 27 November 2022
Curriculum Vitae
- 2021: Habilitation to direct research (HDR) (defended on Sept. 7, electronic document) (Rev.: A. Menciassi, P. Poignet, J.Szewczyk, Pres. J. Troccaz)
- Since 2020: Head of IRMC and Healthtech Master tracks of IRIV Master
- 2019: Internal transfer to Telecom Physique Strasbourg (Engineering school)
- 2018-2020: Expert in the Health technology committee (CES 19) of French National Research Funding Agency (ANR)
- 2006: Recruited as Associate Pr. at University of Strasbourg (formerly Louis Pasteur University)
- 2005: PhD from Louis Pasteur University, Strasbourg, in Medical Robotics under the supervision of M. de Mathelin.
- 2000: Master in Photonics, Image and Cybernetics, ULP, Strasbourg. Intern at the Center for Distributed Robotics at the University of Minnesota, under the direction of N. Papanikolopoulos
- 2000: Engineering diploma from ENSPS shool, Strasbourg. Major in robotics.
Responsibilities
- Member of the Executive Committee of the Healthtech Interdisciplinary thematic Institute
- Scientific manager of Medical axis in national robotic equipment platform (TIRREX)
- Head of the Healthtech track of IRIV master , funded by Healthtech ITI
- Head of the IRMC track of IRIV master hosted by Telecom Physique Strasbourg (M1 IMed / M2 IRMC)
- Referent for Alumni for the engineering school, responsible of yearly poll by the "Conférence des Grandes Ecoles" on former students professional future
Teaching
Associate Professor at Université de Strasbourg, attached to Télécom Physique Strasbourg, (engineering school) since February 2019 (previously at the Physics and engineering department). I mainly teach medical robotics and computer vision for student in engineering at Télécom Physique Strasbourg, mainly at the master 2 level. I also teach automatic control at the Bachelor and Master level for student in the Physics and Engineering department. .
Courses
In TPS, Healthtech Master and Third year TIS DTMI (M2 level),
- CAMI in digestive surgery
- Computer vision for medical robotics (pose estimation de pose, robotic registration and visual servoing)
TPS, M2 IRIV / IRMC
- Registration in medical robotics.
Electronic systems and Mechatronics Bachelor (Third year)
- Course and tutorials on continuous-time systems control
Micro and Nano Electronics Master (First year)
- Course and tutorials on discrete-time systems control
TPS FIP Third year
- Medical robotics course
Summer school on Surgical Robotics in Montpellier
- Tutorial on visual servoing applied to medical robotics, given during the 10th Summer School on Surgical Robotics, on September 2021. Link to the summer school webpage
Research
My research is driven by medical applications where robotics and computer vision can be useful for improving the capabilities of surgeons. In the past years, I have been especially interested in the development of robotic solutions based on cable-driven flexible instruments and endoscopes (STRAS system) and in the use of images (endoscopic white light and OCT) to guide robotic motions (ROBOT project).
- PhD theses supervision (defended theses)
- Gaelle Thomas, defended on October 2021, with J. Vappou and L. Barbé (Robotic Assistance to Blood-Brain barrier opening with focused ultrasounds), in the scope of ANR project 3BOPUS led by CEA - Neurospin (B. Larrat)
- Rafael Aleluia Porto, defended on January 2021 (Learning-based control of flexible endoscopes, partly funded by CAMI labex)
- Laure-Anaïs Chanel, thèse soutenue en mars 2016 (Traitement par HIFU robotisé sous imagerie échographique, funded by CAMI labex)
- Paolo Cabras, defendd in février 2016 : 3D Pose Estimation of Continuously Deformable Instruments in Robotic Endoscopic Surgery (funded by CAMI labex): manuscript
- Antonio De Donno, defended in December 2013 (Assistance à la chirurgie endoluminale et à trocart unique)
- Bérengère Bardou, defended in November 2011 (Développement et commande d'un système robotique pour l'assistance à la chirurgie transluminale)
- Laurent Ott, defended in November 2009 (compensation de mouvements physiologiques en endoscopie flexible). Prix de thèse de l'UDS.
- Theses in progress:
- Guillaume Lods (with Benoit Rosa and Bernard Bayle), since October 2021
- Valentina Scarponi (with Stéphane Cotin, funded by Healthtech), since October 2021
- Thibault Poignonec (with Nabil Zemiti (LIRMM) and Bernard Bayle, funded by CAMI Labex), since October 2019 (Shared control for minimally invasive surgery)
- Co-supervisions:
- Fernando Gonzalez Herrera, (with Benoit Rosa,Gianni Borghesan and Emmanuel Vander Poorten (KUL)) since February 2020
- Guiqiu Liao (with Michalina Gora, Benoit Rosa and Diego Dall'Alba (University Verona), since October 2019
- Paul Mondou (with Jonathan Vappou and Benoit Larrat (CEA Neurospin)), funded by CAMI Labex, since October 2020
- Recent Master students
- François Lavieille
- Thibault Poignonec
- Xuan Thao Ha
- Mohamed Amine Falek
Research interests
- Robotic Assistance to flexible endoscopy, STRAS project
- Vision-based control for medical instruments
- Estimation through vision
- Trajectory planning
- Cable-driven robotic systems
- Image-based registration
Projects
- ProteCT (2012-2016), 36 monthes, led by B. Bayle (AVR-ICube), partners: IHU Strasbourg, Siemens, funded by ARC fundation,
Development of a robot for positioning and inserting needles in non vascular interventional radiology.
- EASE (2014 – 2018), 42 monthes. Coordination: ICube, funded by SATT Conectus. Partners: IRCAD, Karl Storz.
- Development of a version of the STRAS robot compatible with clinics: https://hal.archives-ouvertes.fr/hal-02377106/
- Preclinical validation in the IRCAD: https://www.gastrojournal.org/article/S0016-5085(19)30367-1/pdf
- ROBOT (2017-2020), 48 monthes, led by Nicolas Andreff (FEMTO-ST), funded by INSERM Plan Cancer 2014-2019. Combining robotics and OCT for optical biopsies in the digestive tract.
- Post-doctoral position of Zhongkai Zhang. Robotic control of OCT for tissues scanning: https://hal.archives-ouvertes.fr/hal-03281611/document
- Detection of flexible instruments using optical flow: https://www.frontiersin.org/articles/10.3389/frobt.2019.00086/full
- 3BOPUS (2018-2021) Robotic Assistance to Blood-Brain Barrier opening with Focused Ultrasounds, funded by ANR, led by CEA Neurospin
- PhD thesis of Gaelle Thomas and Paul Mondou
- ATLAS, Innovative Training Network (2019-2023), led by KU Leuven (Emmanuel Vander Poorten)
- PhD thesis of Fernando Gonzalez Herrera
- PhD thesis of Guiqiu Liao. Correction of OCT image acquisitions https://www.sciencedirect.com/science/article/pii/S1361841522000081?via%3Dihub, Robotic OCT acquisitions https://hal.archives-ouvertes.fr/hal-03274296/document
- ALLEGRO-HM Endoscopic procedures guided by hyperspectral imaging
Publications
Invited talks
- Course on visual servoing at Summer School on Surgical Robotics (since 2011).
- French-Belgian days of medical robotics in Brussels « Robotic assistance to intraluminal surgery for colorectal cancer treatment », June 14,15 2018
- Rhenane association of Gastroenterology, 12/15/2018 : « Robotique en endoscopie : où en est-on en 2018 ? »
- Plenary talk at Journées Nationales de la Recherche en Robotique organized by GDR robotique, oct. 2019, « Continuum robotics for intraluminal surgery – Towards safe and efficient minimally invasive surgery »
Open position for PhD thesis
We are looking for a student with background in computer vision or medical image processing for a PhD thesis to start in October 2022 on the correction of volumic OCT robotic-driven acquisitions. The complete description of the project can be found here.
Personal area
Seattle, WA (ICRA 2015)
File:P1040158.jpg Downtown from Lake Union |
File:P1040271.jpg Welcome Dinner at the Experience Music Project / Science Fiction Museum |
File:P1040357.jpg North view from Columbia Center |
Tokyo (Medical robotics seminar at the french embassy)
File:P1010652.jpg Asakusa Shrine |
File:P1010704.jpg Tokyo from Sunshine60 |
File:P1010748.jpg Shibuya by night |
Texas (Computational Surgery 2011)
File:Cimg5488.jpg San Antonio Riverside |
File:Cimg5499.jpg Fort Alamo |
File:Cimg5647.jpg Texas Medical Center Houston |
Minneapolis, MN (EMBC09)
File:Cimg4411.jpg Downtown Minneapolis |
File:Cimg4401.jpg The largest Mall in the USA |
File:Cimg4488.jpg Lake Calhoun) |
Japan (Icra09, Kobe)
File:Cimg3594.jpg Kyoto - Kinkaku-Ji |
File:Cimg3414.jpg Kobe in sunlight |
File:Cimg3460.jpg ... and at night |
Scottsdale, AZ (Biorob08)
File:Cimg2963.jpg Scottsdale at sunset |
File:Cimg3031.jpg The "Sun Valley" viewed from "Camel Moutain" |
File:Cimg2949.jpg The "best student" rest |
California (Icra08, pasadena)
File:Cimg2093.jpg Flock of Sealions |
File:Cimg2173.jpg Spare vehicules |
File:Cimg2060.jpg Santa Barbara |
Beijing (Iros06)
File:Cimg0767.jpg Summer Palace |
File:Cimg0811.jpg Turtle soup |
File:Cimg0831.jpg The Great Wall in Grande muraille in mist |
Ontario (visit by MDRobotics september 06)
File:Cimg0586.jpg Niagara falls |
File:Cimg0624.jpg Toronto from CN tower |
File:Cimg0646.jpg CN tower, Toronto |
San Diego (Medical Imaging 05)
File:IMG 0899.jpg Palace |
File:IMG 0614.jpg Balboa park |
File:IMG 0792.jpg Dolphins in open sea |
Chicago (Cars04)
| [[Image:Photo 032.jpg|thumb|left|200px | |